PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_2AL_434E9F101.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 313aa    MW: 33019.1 Da    PI: 9.7081
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_2AL_434E9F101.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY985.9e-31242300259
                            --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                             D ++WrKYGqK++kgs++pr+YY+C++  gCp++k+ver+ +dp+++++tYegeH+h+
  Traes_2AL_434E9F101.1 242 ADDFSWRKYGQKPIKGSPYPRGYYKCSTVrGCPARKHVERDPSDPSMLIVTYEGEHRHT 300
                            699***********************9888****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105331.5E-17190238IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.801.7E-32228300IPR003657WRKY domain
PROSITE profilePS5081130.32236302IPR003657WRKY domain
SuperFamilySSF1182905.89E-26239300IPR003657WRKY domain
SMARTSM007749.2E-37241301IPR003657WRKY domain
PfamPF031064.1E-26243299IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0009938Biological Processnegative regulation of gibberellic acid mediated signaling pathway
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:1990841Molecular Functionpromoter-specific chromatin binding
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MMTMDLIGGY GRADEQVAIQ EAAAAGLCGM EHLILQLSRT GTSESSPVGS SEAPEQQVDC  60
REITDMTVSK FKKVISILNH RTGHARFRRG PVVAQSQGPA VSEPAPVRAS SSRSMTLDFT  120
KASSGYGNDA GFSVSAASSS FMSSVTGDGS VSNGRGGGSS LMLPPPPSAS CGKPPLASSA  180
ASTGAGAGQK RKCHDHAHSE NVAGGKYGAS GGRCHCSKRR KSRVRRMTRV PAISSKAAEI  240
PADDFSWRKY GQKPIKGSPY PRGYYKCSTV RGCPARKHVE RDPSDPSMLI VTYEGEHRHT  300
PADQEPLAPL PEL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-20228299171WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJX2770540.0JX277054.1 Triticum aestivum WRKY51 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015633572.11e-158PREDICTED: probable WRKY transcription factor 17
SwissprotQ9SV158e-98WRK11_ARATH; Probable WRKY transcription factor 11
TrEMBLW5ARM70.0W5ARM7_WHEAT; Uncharacterized protein
STRINGMLOC_63184.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP61738171
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.11e-68WRKY DNA-binding protein 11
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]